Index

A

already_running() (in module mechlib.amech_io.printer)

assess_pf_convergence() (in module mechroutines.es._routines.tau)

B

bad_conformer() (in module mechlib.amech_io.printer)

bad_equil_ts() (in module mechlib.amech_io.printer) build_fs() (in module mechlib.filesys)

C

channel() (in module mechlib.amech_io.printer) check_hr_pot() (in module mechroutines.es._routines.hr)

checking() (in module mechlib.amech_io.printer) conformer_sampling() (in module mechroutines.es._routines.conformer) constraint_dictionary() (in module mechlib.amech_io.printer)

D

debug_message() (in module mechlib.amech_io.printer)

diverged_ts() (in module mechlib.amech_io.printer) driver_tasks() (in module mechlib.amech_io.printer)

E

energy() (in module mechlib.amech_io.printer) error_message() (in module mechlib.amech_io.printer)

execute_job() (in module mechroutines.es.runner) existing_path() (in module mechlib.amech_io.printer)

F

format_message() (in module mechlib.amech_io.printer)

frequencies() (in module mechlib.amech_io.printer)

G

generating() (in module mechlib.amech_io.printer)

geometry() (in module mechlib.amech_io.printer) gradient() (in module mechlib.amech_io.printer)

H

hindered_rotor_scans() (in module mechroutines.es._routines.hr)

host_name() (in module mechlib.amech_io.printer) hrpotentials() (in module mechlib.amech_io.printer)

I

info_message() (in module mechlib.amech_io.printer)

initial_conformer() (in module mechroutines.es._routines.conformer) initial_geom_path() (in module mechlib.amech_io.printer)

J

job_path() (in module mechlib.amech_io)

K

keyword_list() (in module mechlib.amech_io.printer)

L

lennard_jones_params() (in module mechlib.amech_io.printer)

M

mechlib module mechlib.amech_io module mechlib.amech_io.parser module mechlib.amech_io.printer module mechlib.amech_io.writer module mechlib.filesys module mechlib.reaction module mechroutines.es._routines.conformer module mechroutines.es._routines.hr module mechroutines.es._routines.sp module mechroutines.es._routines.tau module

mechroutines.es.runner module message() (in module mechlib.amech_io.printer) messpf() (in module mechlib.amech_io.printer) missing_input() (in module mechlib.amech_io.printer) module mechlib mechlib.amech_io mechlib.amech_io.parser mechlib.amech_io.printer mechlib.amech_io.writer mechlib.filesys mechlib.reaction mechroutines.es._routines.conformer mechroutines.es._routines.hr mechroutines.es._routines.sp mechroutines.es._routines.tau mechroutines.es.runner molecular_properties() (in module mechlib.amech_io.printer) multi_stage_optimization() (in module mechroutines.es.runner) multireference_calculation_parameters() (in module mechroutines.es.runner)

N

nasa() (in module mechlib.amech_io.printer)

O

obj() (in module mechlib.amech_io.printer) output_keyword_list() (in module mechlib.amech_io.printer)

output_path() (in module mechlib.amech_io) output_task_header() (in module mechlib.amech_io.printer)

P

pes() (in module mechlib.amech_io.printer) prefix_fs() (in module mechlib.filesys)

print_thermo() (in module mechlib.amech_io.printer) program_exit() (in module mechlib.amech_io.printer) program_header() (in module mechlib.amech_io.printer)

Q

qchem_params() (in module mechroutines.es.runner)

R

random_cute_animal() (in module mechlib.amech_io.printer) rate_paths() (in module mechlib.amech_io) rcts_cnf_fs() (in module mechlib.filesys) reaction_fs() (in module mechlib.filesys) read_amech_input() (in module mechlib.amech_io.parser) read_job() (in module mechroutines.es.runner) reading() (in module mechlib.amech_io.printer) rerun_hessian_and_opt() (in module mechroutines.es._routines.sp) results() (in module mechlib.amech_io.printer) reverse_ts_zmatrix() (in module mechlib.reaction) ring_conformer_sampling() (in module mechroutines.es._routines.conformer) rng_loc_for_geo() (in module mechroutines.es._routines.conformer)

root_locs() (in module mechlib.filesys) RST run_energy() (in module mechroutines.es._routines.sp) run_gradient() (in module mechroutines.es._routines.sp) run_hessian() (in module mechroutines.es._routines.sp) run_job() (in module mechroutines.es.runner) run_prop() (in module mechroutines.es._routines.sp) run_rotors() (in module mechlib.amech_io.printer) run_tau() (in module mechroutines.es._routines.tau) run_vpt2() (in module mechroutines.es._routines.sp) runlst() (in module mechlib.amech_io.printer) running() (in module mechlib.amech_io.printer)

S

save_anharmonicity() (in module mechlib.amech_io.printer) save_conformer() (in module mechlib.amech_io.printer) (in module mechroutines.es._routines.conformer) save_conformer_energy() (in module mechlib.amech_io.printer) save_energy() (in module mechlib.amech_io.printer) save_frequencies() (in module mechlib.amech_io.printer) save_geo() (in module mechlib.amech_io.printer) save_gradient() (in module mechlib.amech_io.printer) save_irc() (in module mechlib.amech_io.printer)

save_reference() (in module mechlib.amech_io.printer) save_symmetry() (in module mechlib.amech_io.printer) save_tau() (in module mechroutines.es._routines.tau) saving() (in module mechlib.amech_io.printer) single_conformer() (in module mechroutines.es._routines.conformer) Sphinx split_unstable_full() (in module mechlib.reaction) split_unstable_pes() (in module mechlib.reaction) Sublime Text

T

task_footer() (in module mechlib.amech_io.printer) task_header() (in module mechlib.amech_io.printer) tau_sampling() (in module mechroutines.es._routines.tau) therm_paths_messpf_run_locations() (in module mechlib.amech_io.printer)

therm_paths_messpf_write_locations() (in module mechlib.amech_io.printer) thermo_paths() (in module mechlib.amech_io) this_conformer_is_running() (in module mechroutines.es._routines.conformer) this_conformer_was_run_in_save() (in module mechroutines.es._routines.conformer)

U

unique_fs_confs() (in module mechroutines.es._routines.conformer)

unique_fs_ring_confs() (in module mechroutines.es._routines.conformer)

W

warning_message() (in module mechlib.amech_io.printer)

writing() (in module mechlib.amech_io.printer)

Z

zmatrix_conversion_keys() (in module mechlib.reaction)